Cluster: HRGMv2_2453_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- CGC Family ID: CGCFAM_02216
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2453_1 | HRGMv2_2453_1_285 | 329120 | 331576 | - | GT35 |
| peptidase | HRGMv2_2453_1 | HRGMv2_2453_1_286 | 331687 | 333387 | - | S08.UPA |
| STP | HRGMv2_2453_1 | HRGMv2_2453_1_287 | 333461 | 334315 | - | LysR_substrate |
| TC | HRGMv2_2453_1 | HRGMv2_2453_1_288 | 334312 | 336039 | - | 2.A.58.2.2 |
| pfam | HRGMv2_2453_1 | HRGMv2_2453_1_289 | 336216 | 336680 | - | ThrE | ThrE_2 |
| TC | HRGMv2_2453_1 | HRGMv2_2453_1_290 | 336681 | 337439 | - | 2.A.79.1.4 |
Gene ID: HRGMv2_2453_1_285
Type: CAZyme
Location: 329120 - 331576 (-)
Type: CAZyme
Location: 329120 - 331576 (-)
Gene ID: HRGMv2_2453_1_286
Type: peptidase
Location: 331687 - 333387 (-)
Type: peptidase
Location: 331687 - 333387 (-)
Gene ID: HRGMv2_2453_1_287
Type: STP
Location: 333461 - 334315 (-)
Type: STP
Location: 333461 - 334315 (-)
Gene ID: HRGMv2_2453_1_288
Type: TC
Location: 334312 - 336039 (-)
Type: TC
Location: 334312 - 336039 (-)
Gene ID: HRGMv2_2453_1_289
Type: pfam
Location: 336216 - 336680 (-)
Type: pfam
Location: 336216 - 336680 (-)
Gene ID: HRGMv2_2453_1_290
Type: TC
Location: 336681 - 337439 (-)
Type: TC
Location: 336681 - 337439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_1_290 | vegan > omnivore | 3.03985 | 0.00224 |