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Cluster: HRGMv2_2453_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_28 31711 32910 + GH3
STP HRGMv2_2453_12 HRGMv2_2453_12_29 33013 34440 + Pribosyltran
pfam HRGMv2_2453_12 HRGMv2_2453_12_30 34457 35887 + Lyase_1 | ADSL_C
TC HRGMv2_2453_12 HRGMv2_2453_12_31 36095 37957 + 9.B.18.2.1
STP HRGMv2_2453_12 HRGMv2_2453_12_32 37979 39112 + Aminotran_1_2
TC HRGMv2_2453_12 HRGMv2_2453_12_33 39144 41387 + 9.B.18.1.1
pfam HRGMv2_2453_12 HRGMv2_2453_12_34 41380 42048 + PglD_N
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_35 42038 43132 + GT4
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_36 43134 44234 + GT4
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_37 44224 45126 + GT2
TC HRGMv2_2453_12 HRGMv2_2453_12_38 45142 46257 + 9.B.183.1.9
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_39 46262 47461 + GT4
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_40 47466 48191 + GT32
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_41 48188 49327 + GT4
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_42 49320 50462 + GT4
TC HRGMv2_2453_12 HRGMv2_2453_12_43 50482 52032 + 2.A.66.1.40
CAZyme HRGMv2_2453_12 HRGMv2_2453_12_44 52057 53061 + GT2
Gene ID: HRGMv2_2453_12_28
Type: CAZyme
Location: 31711 - 32910 (+)
Gene ID: HRGMv2_2453_12_29
Type: STP
Location: 33013 - 34440 (+)
Gene ID: HRGMv2_2453_12_30
Type: pfam
Location: 34457 - 35887 (+)
Gene ID: HRGMv2_2453_12_31
Type: TC
Location: 36095 - 37957 (+)
Gene ID: HRGMv2_2453_12_32
Type: STP
Location: 37979 - 39112 (+)
Gene ID: HRGMv2_2453_12_33
Type: TC
Location: 39144 - 41387 (+)
Gene ID: HRGMv2_2453_12_34
Type: pfam
Location: 41380 - 42048 (+)
Gene ID: HRGMv2_2453_12_35
Type: CAZyme
Location: 42038 - 43132 (+)
Gene ID: HRGMv2_2453_12_36
Type: CAZyme
Location: 43134 - 44234 (+)
Gene ID: HRGMv2_2453_12_37
Type: CAZyme
Location: 44224 - 45126 (+)
Gene ID: HRGMv2_2453_12_38
Type: TC
Location: 45142 - 46257 (+)
Gene ID: HRGMv2_2453_12_39
Type: CAZyme
Location: 46262 - 47461 (+)
Gene ID: HRGMv2_2453_12_40
Type: CAZyme
Location: 47466 - 48191 (+)
Gene ID: HRGMv2_2453_12_41
Type: CAZyme
Location: 48188 - 49327 (+)
Gene ID: HRGMv2_2453_12_42
Type: CAZyme
Location: 49320 - 50462 (+)
Gene ID: HRGMv2_2453_12_43
Type: TC
Location: 50482 - 52032 (+)
Gene ID: HRGMv2_2453_12_44
Type: CAZyme
Location: 52057 - 53061 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2453_12_28 vegan > omnivore 1.51261 0.00224
HRGMv2_2453_12_42 vegan > omnivore 1.52763 0.00224
HRGMv2_2453_12_44 vegan > omnivore 2.40110 0.00224

🧭 Explore Read Mapping of CGC

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