Cluster: HRGMv2_2453_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2453_9 | HRGMv2_2453_9_97 | 96121 | 98781 | - | 9.B.144.1.5 |
| CAZyme | HRGMv2_2453_9 | HRGMv2_2453_9_98 | 98744 | 99490 | - | GT2 |
| pfam | HRGMv2_2453_9 | HRGMv2_2453_9_99 | 99698 | 101032 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | HRGMv2_2453_9 | HRGMv2_2453_9_100 | 101150 | 102481 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2453_9_97
Type: TC
Location: 96121 - 98781 (-)
Type: TC
Location: 96121 - 98781 (-)
Gene ID: HRGMv2_2453_9_98
Type: CAZyme
Location: 98744 - 99490 (-)
Type: CAZyme
Location: 98744 - 99490 (-)
Gene ID: HRGMv2_2453_9_99
Type: pfam
Location: 99698 - 101032 (+)
Type: pfam
Location: 99698 - 101032 (+)
Gene ID: HRGMv2_2453_9_100
Type: TC
Location: 101150 - 102481 (-)
Type: TC
Location: 101150 - 102481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_9_98 | vegan > omnivore | 1.51169 | 0.00224 |