Cluster: HRGMv2_2453_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_64 | 67302 | 68765 | - | GH1 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_65 | 68782 | 70635 | - | 4.A.1.2.11 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_66 | 71556 | 73394 | - | 3.A.1.135.6 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_67 | 73387 | 75576 | - | 3.A.1.135.6 |
| TF | HRGMv2_2453_6 | HRGMv2_2453_6_68 | 75569 | 76036 | - | MarR |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_69 | 76757 | 77263 | - | SEC-C |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_70 | 77334 | 79826 | - | 2.A.21.9.1 |
Gene ID: HRGMv2_2453_6_64
Type: CAZyme
Location: 67302 - 68765 (-)
Type: CAZyme
Location: 67302 - 68765 (-)
Gene ID: HRGMv2_2453_6_65
Type: TC
Location: 68782 - 70635 (-)
Type: TC
Location: 68782 - 70635 (-)
Gene ID: HRGMv2_2453_6_66
Type: TC
Location: 71556 - 73394 (-)
Type: TC
Location: 71556 - 73394 (-)
Gene ID: HRGMv2_2453_6_67
Type: TC
Location: 73387 - 75576 (-)
Type: TC
Location: 73387 - 75576 (-)
Gene ID: HRGMv2_2453_6_68
Type: TF
Location: 75569 - 76036 (-)
Type: TF
Location: 75569 - 76036 (-)
Gene ID: HRGMv2_2453_6_69
Type: pfam
Location: 76757 - 77263 (-)
Type: pfam
Location: 76757 - 77263 (-)
Gene ID: HRGMv2_2453_6_70
Type: TC
Location: 77334 - 79826 (-)
Type: TC
Location: 77334 - 79826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.