Cluster: HRGMv2_2453_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2453
- CGC Family ID: CGCFAM_03832
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_47 | 47722 | 49128 | - | GH1 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_48 | 49146 | 50039 | - | ROK |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_49 | 50072 | 50383 | - | PTS_IIA |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_50 | 50386 | 50691 | - | 4.A.3.2.3 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_51 | 50748 | 52061 | - | 4.A.3.2.9 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_52 | 52365 | 53231 | + | SAICAR_synt |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_53 | 53680 | 55818 | - | GH13_11 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_54 | 55866 | 56528 | - | DUF6198 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_55 | 56696 | 57880 | - | 2.A.1.2.18 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_56 | 58114 | 59499 | + | 2.A.25.1.9 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_57 | 59867 | 61333 | - | 9.B.34.1.4 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_58 | 61527 | 62393 | - | 8.A.5.1.4 |
Gene ID: HRGMv2_2453_6_47
Type: CAZyme
Location: 47722 - 49128 (-)
Type: CAZyme
Location: 47722 - 49128 (-)
Gene ID: HRGMv2_2453_6_48
Type: pfam
Location: 49146 - 50039 (-)
Type: pfam
Location: 49146 - 50039 (-)
Gene ID: HRGMv2_2453_6_49
Type: pfam
Location: 50072 - 50383 (-)
Type: pfam
Location: 50072 - 50383 (-)
Gene ID: HRGMv2_2453_6_50
Type: TC
Location: 50386 - 50691 (-)
Type: TC
Location: 50386 - 50691 (-)
Gene ID: HRGMv2_2453_6_51
Type: TC
Location: 50748 - 52061 (-)
Type: TC
Location: 50748 - 52061 (-)
Gene ID: HRGMv2_2453_6_52
Type: pfam
Location: 52365 - 53231 (+)
Type: pfam
Location: 52365 - 53231 (+)
Gene ID: HRGMv2_2453_6_53
Type: CAZyme
Location: 53680 - 55818 (-)
Type: CAZyme
Location: 53680 - 55818 (-)
Gene ID: HRGMv2_2453_6_54
Type: pfam
Location: 55866 - 56528 (-)
Type: pfam
Location: 55866 - 56528 (-)
Gene ID: HRGMv2_2453_6_55
Type: TC
Location: 56696 - 57880 (-)
Type: TC
Location: 56696 - 57880 (-)
Gene ID: HRGMv2_2453_6_56
Type: TC
Location: 58114 - 59499 (+)
Type: TC
Location: 58114 - 59499 (+)
Gene ID: HRGMv2_2453_6_57
Type: TC
Location: 59867 - 61333 (-)
Type: TC
Location: 59867 - 61333 (-)
Gene ID: HRGMv2_2453_6_58
Type: TC
Location: 61527 - 62393 (-)
Type: TC
Location: 61527 - 62393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.