Cluster: HRGMv2_2453_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_2453
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_2 | 116 | 1666 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_3 | 1682 | 2731 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_4 | 2757 | 3659 | - | GT2 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_5 | 3691 | 4830 | - | Wzy_C |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_6 | 5003 | 6031 | - | GT2 |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_7 | 6091 | 7014 | - | GT2 |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_8 | 7047 | 8231 | - | GT4 |
| pfam | HRGMv2_2453_6 | HRGMv2_2453_6_9 | 8260 | 8787 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_10 | 8802 | 9821 | - | GT32 |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_11 | 9823 | 10926 | - | GT4 |
| CAZyme | HRGMv2_2453_6 | HRGMv2_2453_6_12 | 10919 | 12076 | - | GT4 |
| TC | HRGMv2_2453_6 | HRGMv2_2453_6_13 | 12091 | 13518 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_2453_6_2
Type: TC
Location: 116 - 1666 (-)
Type: TC
Location: 116 - 1666 (-)
Gene ID: HRGMv2_2453_6_3
Type: pfam
Location: 1682 - 2731 (-)
Type: pfam
Location: 1682 - 2731 (-)
Gene ID: HRGMv2_2453_6_4
Type: CAZyme
Location: 2757 - 3659 (-)
Type: CAZyme
Location: 2757 - 3659 (-)
Gene ID: HRGMv2_2453_6_5
Type: pfam
Location: 3691 - 4830 (-)
Type: pfam
Location: 3691 - 4830 (-)
Gene ID: HRGMv2_2453_6_6
Type: CAZyme
Location: 5003 - 6031 (-)
Type: CAZyme
Location: 5003 - 6031 (-)
Gene ID: HRGMv2_2453_6_7
Type: CAZyme
Location: 6091 - 7014 (-)
Type: CAZyme
Location: 6091 - 7014 (-)
Gene ID: HRGMv2_2453_6_8
Type: CAZyme
Location: 7047 - 8231 (-)
Type: CAZyme
Location: 7047 - 8231 (-)
Gene ID: HRGMv2_2453_6_9
Type: pfam
Location: 8260 - 8787 (-)
Type: pfam
Location: 8260 - 8787 (-)
Gene ID: HRGMv2_2453_6_10
Type: CAZyme
Location: 8802 - 9821 (-)
Type: CAZyme
Location: 8802 - 9821 (-)
Gene ID: HRGMv2_2453_6_11
Type: CAZyme
Location: 9823 - 10926 (-)
Type: CAZyme
Location: 9823 - 10926 (-)
Gene ID: HRGMv2_2453_6_12
Type: CAZyme
Location: 10919 - 12076 (-)
Type: CAZyme
Location: 10919 - 12076 (-)
Gene ID: HRGMv2_2453_6_13
Type: TC
Location: 12091 - 13518 (-)
Type: TC
Location: 12091 - 13518 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.