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Cluster: HRGMv2_2453_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2453_5 HRGMv2_2453_5_49 48365 49096 + 9.B.158.1.1
STP HRGMv2_2453_5 HRGMv2_2453_5_50 49166 50470 + Glycos_trans_3N
pfam HRGMv2_2453_5 HRGMv2_2453_5_51 50508 50924 + PrcB_C
TC HRGMv2_2453_5 HRGMv2_2453_5_52 51012 53048 + 3.A.25.2.1
pfam HRGMv2_2453_5 HRGMv2_2453_5_53 53194 53994 - adh_short | KR | adh_short_C2
pfam HRGMv2_2453_5 HRGMv2_2453_5_54 54270 54518 + VEG
CAZyme HRGMv2_2453_5 HRGMv2_2453_5_55 54585 56147 + CBM50
Gene ID: HRGMv2_2453_5_49
Type: TC
Location: 48365 - 49096 (+)
Gene ID: HRGMv2_2453_5_50
Type: STP
Location: 49166 - 50470 (+)
Gene ID: HRGMv2_2453_5_51
Type: pfam
Location: 50508 - 50924 (+)
Gene ID: HRGMv2_2453_5_52
Type: TC
Location: 51012 - 53048 (+)
Gene ID: HRGMv2_2453_5_53
Type: pfam
Location: 53194 - 53994 (-)
Gene ID: HRGMv2_2453_5_54
Type: pfam
Location: 54270 - 54518 (+)
Gene ID: HRGMv2_2453_5_55
Type: CAZyme
Location: 54585 - 56147 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2453_5_50 vegan > omnivore 1.02170 0.00224
HRGMv2_2453_5_51 vegan > omnivore 2.30502 0.00224

🧭 Explore Read Mapping of CGC

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