dbCAN Logo

Cluster: HRGMv2_2453_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2453_4 HRGMv2_2453_4_139 138747 140411 + 2.A.58.2.2
CAZyme HRGMv2_2453_4 HRGMv2_2453_4_140 140491 142413 - GH13_39
CAZyme HRGMv2_2453_4 HRGMv2_2453_4_141 142442 144883 - GT35
CAZyme HRGMv2_2453_4 HRGMv2_2453_4_142 144988 146433 - GT5
pfam HRGMv2_2453_4 HRGMv2_2453_4_143 146426 147559 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2453_4 HRGMv2_2453_4_144 147573 148757 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2453_4 HRGMv2_2453_4_145 148774 151068 - CBM48 | GH13_9
STP HRGMv2_2453_4 HRGMv2_2453_4_146 151475 152692 - ACT | PALP
TC HRGMv2_2453_4 HRGMv2_2453_4_147 152694 153629 - 3.A.5.1.1
Gene ID: HRGMv2_2453_4_139
Type: TC
Location: 138747 - 140411 (+)
Gene ID: HRGMv2_2453_4_140
Type: CAZyme
Location: 140491 - 142413 (-)
Gene ID: HRGMv2_2453_4_141
Type: CAZyme
Location: 142442 - 144883 (-)
Gene ID: HRGMv2_2453_4_142
Type: CAZyme
Location: 144988 - 146433 (-)
Gene ID: HRGMv2_2453_4_143
Type: pfam
Location: 146426 - 147559 (-)
Gene ID: HRGMv2_2453_4_144
Type: pfam
Location: 147573 - 148757 (-)
Gene ID: HRGMv2_2453_4_145
Type: CAZyme
Location: 148774 - 151068 (-)
Gene ID: HRGMv2_2453_4_146
Type: STP
Location: 151475 - 152692 (-)
Gene ID: HRGMv2_2453_4_147
Type: TC
Location: 152694 - 153629 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2453_4_141 vegan > omnivore 1.59869 0.00224
HRGMv2_2453_4_145 vegan > omnivore 1.07072 0.00224

🧭 Explore Read Mapping of CGC

← Back to Cluster List