Cluster: HRGMv2_2453_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2453_4 | HRGMv2_2453_4_103 | 99011 | 100477 | - | GH32 |
| TC | HRGMv2_2453_4 | HRGMv2_2453_4_104 | 100731 | 102674 | - | 4.A.1.2.12 |
| TF | HRGMv2_2453_4 | HRGMv2_2453_4_105 | 102943 | 103923 | - | LacI |
| TC | HRGMv2_2453_4 | HRGMv2_2453_4_106 | 103978 | 105312 | - | 1.C.105.2.8 |
Gene ID: HRGMv2_2453_4_103
Type: CAZyme
Location: 99011 - 100477 (-)
Type: CAZyme
Location: 99011 - 100477 (-)
Gene ID: HRGMv2_2453_4_104
Type: TC
Location: 100731 - 102674 (-)
Type: TC
Location: 100731 - 102674 (-)
Gene ID: HRGMv2_2453_4_105
Type: TF
Location: 102943 - 103923 (-)
Type: TF
Location: 102943 - 103923 (-)
Gene ID: HRGMv2_2453_4_106
Type: TC
Location: 103978 - 105312 (-)
Type: TC
Location: 103978 - 105312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_4_105 | vegan > omnivore | 2.00889 | 0.00224 |