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Cluster: HRGMv2_2452_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2452_6 HRGMv2_2452_6_35 32432 34954 + GT4
pfam HRGMv2_2452_6 HRGMv2_2452_6_36 34972 36738 + Glyphos_transf
TC HRGMv2_2452_6 HRGMv2_2452_6_37 36820 37596 + 3.A.1.103.1
TC HRGMv2_2452_6 HRGMv2_2452_6_38 37606 38346 + 3.A.1.103.5
pfam HRGMv2_2452_6 HRGMv2_2452_6_39 38369 38785 + CTP_transf_like
pfam HRGMv2_2452_6 HRGMv2_2452_6_40 38792 39964 + Glyphos_transf
CAZyme HRGMv2_2452_6 HRGMv2_2452_6_41 39973 42120 + GT2
pfam HRGMv2_2452_6 HRGMv2_2452_6_42 42130 44514 + Sulfatase
CAZyme HRGMv2_2452_6 HRGMv2_2452_6_43 44542 45477 + GT2
pfam HRGMv2_2452_6 HRGMv2_2452_6_44 45486 46655 + Glyphos_transf
pfam HRGMv2_2452_6 HRGMv2_2452_6_45 46716 47789 - LytR_cpsA_psr
TC HRGMv2_2452_6 HRGMv2_2452_6_46 47802 49232 - 9.B.18.1.1
Gene ID: HRGMv2_2452_6_35
Type: CAZyme
Location: 32432 - 34954 (+)
Gene ID: HRGMv2_2452_6_36
Type: pfam
Location: 34972 - 36738 (+)
Gene ID: HRGMv2_2452_6_37
Type: TC
Location: 36820 - 37596 (+)
Gene ID: HRGMv2_2452_6_38
Type: TC
Location: 37606 - 38346 (+)
Gene ID: HRGMv2_2452_6_39
Type: pfam
Location: 38369 - 38785 (+)
Gene ID: HRGMv2_2452_6_40
Type: pfam
Location: 38792 - 39964 (+)
Gene ID: HRGMv2_2452_6_41
Type: CAZyme
Location: 39973 - 42120 (+)
Gene ID: HRGMv2_2452_6_42
Type: pfam
Location: 42130 - 44514 (+)
Gene ID: HRGMv2_2452_6_43
Type: CAZyme
Location: 44542 - 45477 (+)
Gene ID: HRGMv2_2452_6_44
Type: pfam
Location: 45486 - 46655 (+)
Gene ID: HRGMv2_2452_6_45
Type: pfam
Location: 46716 - 47789 (-)
Gene ID: HRGMv2_2452_6_46
Type: TC
Location: 47802 - 49232 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2452_6_39 vegetarian > omnivore 1.28800 0.02705
HRGMv2_2452_6_44 vegan > omnivore 1.55129 0.00454

🧭 Explore Read Mapping of CGC

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