Cluster: HRGMv2_2452_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2452
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2452_5 | HRGMv2_2452_5_82 | 91432 | 92766 | + | 1.C.105.2.8 |
| TF | HRGMv2_2452_5 | HRGMv2_2452_5_83 | 92859 | 93839 | + | LacI |
| TC | HRGMv2_2452_5 | HRGMv2_2452_5_84 | 94156 | 96096 | + | 4.A.1.2.12 |
| CAZyme | HRGMv2_2452_5 | HRGMv2_2452_5_85 | 96131 | 97597 | + | GH32 |
Gene ID: HRGMv2_2452_5_82
Type: TC
Location: 91432 - 92766 (+)
Type: TC
Location: 91432 - 92766 (+)
Gene ID: HRGMv2_2452_5_83
Type: TF
Location: 92859 - 93839 (+)
Type: TF
Location: 92859 - 93839 (+)
Gene ID: HRGMv2_2452_5_84
Type: TC
Location: 94156 - 96096 (+)
Type: TC
Location: 94156 - 96096 (+)
Gene ID: HRGMv2_2452_5_85
Type: CAZyme
Location: 96131 - 97597 (+)
Type: CAZyme
Location: 96131 - 97597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2452_5_83 | vegan > omnivore | 1.69946 | 0.00454 |