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Cluster: HRGMv2_2452_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2452_5 HRGMv2_2452_5_40 43701 44636 + 3.A.5.1.1
STP HRGMv2_2452_5 HRGMv2_2452_5_41 44638 45855 + ACT | PALP
NULL(UNKNOWN) HRGMv2_2452_5 HRGMv2_2452_5_42 45658 46125 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2452_5 HRGMv2_2452_5_43 46262 48571 + CBM48 | GH13_9
pfam HRGMv2_2452_5 HRGMv2_2452_5_44 48588 49772 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2452_5 HRGMv2_2452_5_45 49786 50919 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2452_5 HRGMv2_2452_5_46 50912 52357 + GT5
CAZyme HRGMv2_2452_5 HRGMv2_2452_5_47 52467 54905 + GT35
CAZyme HRGMv2_2452_5 HRGMv2_2452_5_48 54933 56855 + GH13_39
TC HRGMv2_2452_5 HRGMv2_2452_5_49 56931 58604 - 2.A.58.2.2
Gene ID: HRGMv2_2452_5_40
Type: TC
Location: 43701 - 44636 (+)
Gene ID: HRGMv2_2452_5_41
Type: STP
Location: 44638 - 45855 (+)
Gene ID: HRGMv2_2452_5_42
Type:
Location: 45658 - 46125 (-)
Gene ID: HRGMv2_2452_5_43
Type: CAZyme
Location: 46262 - 48571 (+)
Gene ID: HRGMv2_2452_5_44
Type: pfam
Location: 48588 - 49772 (+)
Gene ID: HRGMv2_2452_5_45
Type: pfam
Location: 49786 - 50919 (+)
Gene ID: HRGMv2_2452_5_46
Type: CAZyme
Location: 50912 - 52357 (+)
Gene ID: HRGMv2_2452_5_47
Type: CAZyme
Location: 52467 - 54905 (+)
Gene ID: HRGMv2_2452_5_48
Type: CAZyme
Location: 54933 - 56855 (+)
Gene ID: HRGMv2_2452_5_49
Type: TC
Location: 56931 - 58604 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2452_5_46 vegan > omnivore 1.12871 0.00454

🧭 Explore Read Mapping of CGC

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