dbCAN Logo

Cluster: HRGMv2_2452_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_11 12562 13761 + GH3
STP HRGMv2_2452_3 HRGMv2_2452_3_12 13864 15291 + Pribosyltran
pfam HRGMv2_2452_3 HRGMv2_2452_3_13 15308 16738 + Lyase_1 | ADSL_C
TC HRGMv2_2452_3 HRGMv2_2452_3_14 16998 18860 + 9.B.18.2.1
STP HRGMv2_2452_3 HRGMv2_2452_3_15 18881 20014 + Aminotran_1_2
TC HRGMv2_2452_3 HRGMv2_2452_3_16 20045 22288 + 9.B.18.1.1
pfam HRGMv2_2452_3 HRGMv2_2452_3_17 22281 22949 + PglD_N
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_18 22939 24033 + GT4
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_19 24035 25144 + GT4
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_20 25125 26027 + GT2
TC HRGMv2_2452_3 HRGMv2_2452_3_21 26044 27159 + 9.B.183.1.9
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_22 27162 28361 + GT4
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_23 28366 29091 + GT32
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_24 29121 30260 + GT4
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_25 30253 31398 + GT4
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_26 31391 32389 + GT2
pfam HRGMv2_2452_3 HRGMv2_2452_3_27 32414 33583 + PS_pyruv_trans
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_28 33610 34737 + GH105
TC HRGMv2_2452_3 HRGMv2_2452_3_29 34741 36285 + 2.A.66.1.40
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_30 36282 37334 + GT2
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_31 37354 38322 + GT2
CAZyme HRGMv2_2452_3 HRGMv2_2452_3_32 38371 39375 + GT2
Gene ID: HRGMv2_2452_3_11
Type: CAZyme
Location: 12562 - 13761 (+)
Gene ID: HRGMv2_2452_3_12
Type: STP
Location: 13864 - 15291 (+)
Gene ID: HRGMv2_2452_3_13
Type: pfam
Location: 15308 - 16738 (+)
Gene ID: HRGMv2_2452_3_14
Type: TC
Location: 16998 - 18860 (+)
Gene ID: HRGMv2_2452_3_15
Type: STP
Location: 18881 - 20014 (+)
Gene ID: HRGMv2_2452_3_16
Type: TC
Location: 20045 - 22288 (+)
Gene ID: HRGMv2_2452_3_17
Type: pfam
Location: 22281 - 22949 (+)
Gene ID: HRGMv2_2452_3_18
Type: CAZyme
Location: 22939 - 24033 (+)
Gene ID: HRGMv2_2452_3_19
Type: CAZyme
Location: 24035 - 25144 (+)
Gene ID: HRGMv2_2452_3_20
Type: CAZyme
Location: 25125 - 26027 (+)
Gene ID: HRGMv2_2452_3_21
Type: TC
Location: 26044 - 27159 (+)
Gene ID: HRGMv2_2452_3_22
Type: CAZyme
Location: 27162 - 28361 (+)
Gene ID: HRGMv2_2452_3_23
Type: CAZyme
Location: 28366 - 29091 (+)
Gene ID: HRGMv2_2452_3_24
Type: CAZyme
Location: 29121 - 30260 (+)
Gene ID: HRGMv2_2452_3_25
Type: CAZyme
Location: 30253 - 31398 (+)
Gene ID: HRGMv2_2452_3_26
Type: CAZyme
Location: 31391 - 32389 (+)
Gene ID: HRGMv2_2452_3_27
Type: pfam
Location: 32414 - 33583 (+)
Gene ID: HRGMv2_2452_3_28
Type: CAZyme
Location: 33610 - 34737 (+)
Gene ID: HRGMv2_2452_3_29
Type: TC
Location: 34741 - 36285 (+)
Gene ID: HRGMv2_2452_3_30
Type: CAZyme
Location: 36282 - 37334 (+)
Gene ID: HRGMv2_2452_3_31
Type: CAZyme
Location: 37354 - 38322 (+)
Gene ID: HRGMv2_2452_3_32
Type: CAZyme
Location: 38371 - 39375 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2452_3_11 vegan > omnivore 1.16284 0.00454
HRGMv2_2452_3_11 vegetarian > omnivore 1.73733 0.01315
HRGMv2_2452_3_22 vegan > omnivore 2.78558 0.00454

🧭 Explore Read Mapping of CGC

← Back to Cluster List