Cluster: HRGMv2_2452_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2452
- CGC Family ID: CGCFAM_00264
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2452_50 | HRGMv2_2452_50_14 | 12620 | 14026 | - | GH1 |
| pfam | HRGMv2_2452_50 | HRGMv2_2452_50_15 | 14042 | 14935 | - | ROK |
| pfam | HRGMv2_2452_50 | HRGMv2_2452_50_16 | 14968 | 15279 | - | PTS_IIA |
| TC | HRGMv2_2452_50 | HRGMv2_2452_50_17 | 15282 | 15587 | - | 4.A.3.2.3 |
| TC | HRGMv2_2452_50 | HRGMv2_2452_50_18 | 15674 | 16987 | - | 4.A.3.2.9 |
Gene ID: HRGMv2_2452_50_14
Type: CAZyme
Location: 12620 - 14026 (-)
Type: CAZyme
Location: 12620 - 14026 (-)
Gene ID: HRGMv2_2452_50_15
Type: pfam
Location: 14042 - 14935 (-)
Type: pfam
Location: 14042 - 14935 (-)
Gene ID: HRGMv2_2452_50_16
Type: pfam
Location: 14968 - 15279 (-)
Type: pfam
Location: 14968 - 15279 (-)
Gene ID: HRGMv2_2452_50_17
Type: TC
Location: 15282 - 15587 (-)
Type: TC
Location: 15282 - 15587 (-)
Gene ID: HRGMv2_2452_50_18
Type: TC
Location: 15674 - 16987 (-)
Type: TC
Location: 15674 - 16987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.