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Cluster: HRGMv2_2452_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2452_46 HRGMv2_2452_46_3 2284 3462 + 2.A.120.1.3
STP HRGMv2_2452_46 HRGMv2_2452_46_4 3760 4563 + PfkB
TC HRGMv2_2452_46 HRGMv2_2452_46_5 4569 5741 + 2.A.39.1.3
pfam HRGMv2_2452_46 HRGMv2_2452_46_6 5971 6885 + AP_endonuc_2
STP HRGMv2_2452_46 HRGMv2_2452_46_7 6932 7879 + Glucokinase
CAZyme HRGMv2_2452_46 HRGMv2_2452_46_8 7892 8965 + GH179
pfam HRGMv2_2452_46 HRGMv2_2452_46_9 8980 9747 + Amidohydro_2
CAZyme HRGMv2_2452_46 HRGMv2_2452_46_10 9918 12329 + GH39
pfam HRGMv2_2452_46 HRGMv2_2452_46_11 12566 13216 + His_Phos_1
TC HRGMv2_2452_46 HRGMv2_2452_46_12 13248 13886 + 2.A.115.2.8
pfam HRGMv2_2452_46 HRGMv2_2452_46_13 14040 14498 + CGDB
pfam HRGMv2_2452_46 HRGMv2_2452_46_14 14521 15645 + AP_endonuc_2
CAZyme HRGMv2_2452_46 HRGMv2_2452_46_15 15695 16795 + GH179
TC HRGMv2_2452_46 HRGMv2_2452_46_16 16888 18771 + 4.A.1.2.11
Gene ID: HRGMv2_2452_46_3
Type: TC
Location: 2284 - 3462 (+)
Gene ID: HRGMv2_2452_46_4
Type: STP
Location: 3760 - 4563 (+)
Gene ID: HRGMv2_2452_46_5
Type: TC
Location: 4569 - 5741 (+)
Gene ID: HRGMv2_2452_46_6
Type: pfam
Location: 5971 - 6885 (+)
Gene ID: HRGMv2_2452_46_7
Type: STP
Location: 6932 - 7879 (+)
Gene ID: HRGMv2_2452_46_8
Type: CAZyme
Location: 7892 - 8965 (+)
Gene ID: HRGMv2_2452_46_9
Type: pfam
Location: 8980 - 9747 (+)
Gene ID: HRGMv2_2452_46_10
Type: CAZyme
Location: 9918 - 12329 (+)
Gene ID: HRGMv2_2452_46_11
Type: pfam
Location: 12566 - 13216 (+)
Gene ID: HRGMv2_2452_46_12
Type: TC
Location: 13248 - 13886 (+)
Gene ID: HRGMv2_2452_46_13
Type: pfam
Location: 14040 - 14498 (+)
Gene ID: HRGMv2_2452_46_14
Type: pfam
Location: 14521 - 15645 (+)
Gene ID: HRGMv2_2452_46_15
Type: CAZyme
Location: 15695 - 16795 (+)
Gene ID: HRGMv2_2452_46_16
Type: TC
Location: 16888 - 18771 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2452_46_5 vegan > omnivore 1.00907 0.00454

🧭 Explore Read Mapping of CGC

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