Cluster: HRGMv2_2452_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2452
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2452_1 | HRGMv2_2452_1_126 | 124324 | 125889 | - | CBM50 |
| pfam | HRGMv2_2452_1 | HRGMv2_2452_1_127 | 125956 | 126204 | - | VEG |
| TC | HRGMv2_2452_1 | HRGMv2_2452_1_128 | 126431 | 127780 | - | 2.A.23.1.5 |
| TF | HRGMv2_2452_1 | HRGMv2_2452_1_129 | 127845 | 128597 | - | HTH_DeoR |
| TC | HRGMv2_2452_1 | HRGMv2_2452_1_130 | 128726 | 129718 | - | 8.A.5.1.4 |
Gene ID: HRGMv2_2452_1_126
Type: CAZyme
Location: 124324 - 125889 (-)
Type: CAZyme
Location: 124324 - 125889 (-)
Gene ID: HRGMv2_2452_1_127
Type: pfam
Location: 125956 - 126204 (-)
Type: pfam
Location: 125956 - 126204 (-)
Gene ID: HRGMv2_2452_1_128
Type: TC
Location: 126431 - 127780 (-)
Type: TC
Location: 126431 - 127780 (-)
Gene ID: HRGMv2_2452_1_129
Type: TF
Location: 127845 - 128597 (-)
Type: TF
Location: 127845 - 128597 (-)
Gene ID: HRGMv2_2452_1_130
Type: TC
Location: 128726 - 129718 (-)
Type: TC
Location: 128726 - 129718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.