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Cluster: HRGMv2_2449_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2449_235 HRGMv2_2449_235_13 13206 14552 - GH91
CAZyme HRGMv2_2449_235 HRGMv2_2449_235_14 14583 16067 - GH32
TC HRGMv2_2449_235 HRGMv2_2449_235_15 16089 16916 - 3.A.1.1.25
TC HRGMv2_2449_235 HRGMv2_2449_235_16 16948 17829 - 3.A.1.1.37
Gene ID: HRGMv2_2449_235_13
Type: CAZyme
Location: 13206 - 14552 (-)
Gene ID: HRGMv2_2449_235_14
Type: CAZyme
Location: 14583 - 16067 (-)
Gene ID: HRGMv2_2449_235_15
Type: TC
Location: 16089 - 16916 (-)
Gene ID: HRGMv2_2449_235_16
Type: TC
Location: 16948 - 17829 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2449_235_16 vegan > omnivore 2.67188 0.00969

🧭 Explore Read Mapping of CGC

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