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Cluster: HRGMv2_2449_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2449_33 HRGMv2_2449_33_6 3858 6200 - GH65
STP HRGMv2_2449_33 HRGMv2_2449_33_7 6197 7057 - PIG-L
TC HRGMv2_2449_33 HRGMv2_2449_33_8 7073 7903 - 3.A.1.1.42
TC HRGMv2_2449_33 HRGMv2_2449_33_9 7900 8799 - 3.A.1.1.7
STP HRGMv2_2449_33 HRGMv2_2449_33_10 8895 10142 - SBP_bac_1
TC HRGMv2_2449_33 HRGMv2_2449_33_11 10217 11923 - 9.B.33.1.1
Gene ID: HRGMv2_2449_33_6
Type: CAZyme
Location: 3858 - 6200 (-)
Gene ID: HRGMv2_2449_33_7
Type: STP
Location: 6197 - 7057 (-)
Gene ID: HRGMv2_2449_33_8
Type: TC
Location: 7073 - 7903 (-)
Gene ID: HRGMv2_2449_33_9
Type: TC
Location: 7900 - 8799 (-)
Gene ID: HRGMv2_2449_33_10
Type: STP
Location: 8895 - 10142 (-)
Gene ID: HRGMv2_2449_33_11
Type: TC
Location: 10217 - 11923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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