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Cluster: HRGMv2_2449_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2449_175 HRGMv2_2449_175_10 13601 15736 + CBM48 | GH13_9
peptidase HRGMv2_2449_175 HRGMv2_2449_175_11 16130 17491 + M20.UND
TC HRGMv2_2449_175 HRGMv2_2449_175_12 17488 18582 + 3.A.1.11.1
TC HRGMv2_2449_175 HRGMv2_2449_175_13 18579 19433 + 3.A.1.11.1
TC HRGMv2_2449_175 HRGMv2_2449_175_14 19430 20206 + 3.A.1.11.1
TC HRGMv2_2449_175 HRGMv2_2449_175_15 20231 21274 + 3.A.1.11.8
TC HRGMv2_2449_175 HRGMv2_2449_175_16 21274 22089 + 3.A.1.11.1
TC HRGMv2_2449_175 HRGMv2_2449_175_17 22104 23705 + 3.A.1.11.7
Gene ID: HRGMv2_2449_175_10
Type: CAZyme
Location: 13601 - 15736 (+)
Gene ID: HRGMv2_2449_175_11
Type: peptidase
Location: 16130 - 17491 (+)
Gene ID: HRGMv2_2449_175_12
Type: TC
Location: 17488 - 18582 (+)
Gene ID: HRGMv2_2449_175_13
Type: TC
Location: 18579 - 19433 (+)
Gene ID: HRGMv2_2449_175_14
Type: TC
Location: 19430 - 20206 (+)
Gene ID: HRGMv2_2449_175_15
Type: TC
Location: 20231 - 21274 (+)
Gene ID: HRGMv2_2449_175_16
Type: TC
Location: 21274 - 22089 (+)
Gene ID: HRGMv2_2449_175_17
Type: TC
Location: 22104 - 23705 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2449_175_16 vegan > omnivore 1.91780 0.00969
HRGMv2_2449_175_17 vegan > omnivore 1.29404 0.00969

🧭 Explore Read Mapping of CGC

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