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Cluster: HRGMv2_2449_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2449_143 HRGMv2_2449_143_30 31581 34136 + GH95
peptidase HRGMv2_2449_143 HRGMv2_2449_143_31 34303 35568 - I04.UPW
TC HRGMv2_2449_143 HRGMv2_2449_143_32 35752 36675 + 8.A.5.1.7
NULL(UNKNOWN) HRGMv2_2449_143 HRGMv2_2449_143_33 36781 37287 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2449_143 HRGMv2_2449_143_34 37287 37733 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_2449_143 HRGMv2_2449_143_35 37997 39457 - GH1
TC HRGMv2_2449_143 HRGMv2_2449_143_36 39478 40851 - 4.A.1.2.11
Gene ID: HRGMv2_2449_143_30
Type: CAZyme
Location: 31581 - 34136 (+)
Gene ID: HRGMv2_2449_143_31
Type: peptidase
Location: 34303 - 35568 (-)
Gene ID: HRGMv2_2449_143_32
Type: TC
Location: 35752 - 36675 (+)
Gene ID: HRGMv2_2449_143_33
Type:
Location: 36781 - 37287 (-)
Gene ID: HRGMv2_2449_143_34
Type: pfam
Location: 37287 - 37733 (-)
Gene ID: HRGMv2_2449_143_35
Type: CAZyme
Location: 37997 - 39457 (-)
Gene ID: HRGMv2_2449_143_36
Type: TC
Location: 39478 - 40851 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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