dbCAN Logo

Cluster: HRGMv2_2449_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2449_143 HRGMv2_2449_143_1 2 1087 + 2.A.25.1.9
pfam HRGMv2_2449_143 HRGMv2_2449_143_2 1162 2505 - Ni_insertion
pfam HRGMv2_2449_143 HRGMv2_2449_143_3 2551 3321 - AIRC
CAZyme HRGMv2_2449_143 HRGMv2_2449_143_4 3465 5120 - GH13_29
TC HRGMv2_2449_143 HRGMv2_2449_143_5 5130 6485 - 4.A.1.2.13
pfam HRGMv2_2449_143 HRGMv2_2449_143_6 6565 6909 + UTRA
TC HRGMv2_2449_143 HRGMv2_2449_143_7 6944 8257 - 2.A.66.1.26
TC HRGMv2_2449_143 HRGMv2_2449_143_8 8267 8569 - 2.A.78.1.1
TC HRGMv2_2449_143 HRGMv2_2449_143_9 8586 9290 - 2.A.78.1.1
pfam HRGMv2_2449_143 HRGMv2_2449_143_10 9287 10387 - Aldo_ket_red | Fer4_7 | Fer4_8 | Fer4_9 | Fer4_10 | Fer4_17
TC HRGMv2_2449_143 HRGMv2_2449_143_11 10425 11795 - 2.A.66.1.28
Gene ID: HRGMv2_2449_143_1
Type: TC
Location: 2 - 1087 (+)
Gene ID: HRGMv2_2449_143_2
Type: pfam
Location: 1162 - 2505 (-)
Gene ID: HRGMv2_2449_143_3
Type: pfam
Location: 2551 - 3321 (-)
Gene ID: HRGMv2_2449_143_4
Type: CAZyme
Location: 3465 - 5120 (-)
Gene ID: HRGMv2_2449_143_5
Type: TC
Location: 5130 - 6485 (-)
Gene ID: HRGMv2_2449_143_6
Type: pfam
Location: 6565 - 6909 (+)
Gene ID: HRGMv2_2449_143_7
Type: TC
Location: 6944 - 8257 (-)
Gene ID: HRGMv2_2449_143_8
Type: TC
Location: 8267 - 8569 (-)
Gene ID: HRGMv2_2449_143_9
Type: TC
Location: 8586 - 9290 (-)
Gene ID: HRGMv2_2449_143_10
Type: pfam
Location: 9287 - 10387 (-)
Gene ID: HRGMv2_2449_143_11
Type: TC
Location: 10425 - 11795 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List