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Cluster: HRGMv2_2449_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2449_131 HRGMv2_2449_131_4 2865 3599 + 3.A.1.103.5
pfam HRGMv2_2449_131 HRGMv2_2449_131_5 3836 6022 + Glyphos_transf
pfam HRGMv2_2449_131 HRGMv2_2449_131_6 6057 7631 + Glyphos_transf
TC HRGMv2_2449_131 HRGMv2_2449_131_7 7651 8754 + 9.B.97.6.1
pfam HRGMv2_2449_131 HRGMv2_2449_131_8 8756 9919 + Glyphos_transf
CAZyme HRGMv2_2449_131 HRGMv2_2449_131_9 9903 12299 + GT4
Gene ID: HRGMv2_2449_131_4
Type: TC
Location: 2865 - 3599 (+)
Gene ID: HRGMv2_2449_131_5
Type: pfam
Location: 3836 - 6022 (+)
Gene ID: HRGMv2_2449_131_6
Type: pfam
Location: 6057 - 7631 (+)
Gene ID: HRGMv2_2449_131_7
Type: TC
Location: 7651 - 8754 (+)
Gene ID: HRGMv2_2449_131_8
Type: pfam
Location: 8756 - 9919 (+)
Gene ID: HRGMv2_2449_131_9
Type: CAZyme
Location: 9903 - 12299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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