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Cluster: HRGMv2_2449_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2449_120 HRGMv2_2449_120_54 66159 67409 + 2.A.1.24.4
CAZyme HRGMv2_2449_120 HRGMv2_2449_120_55 67527 69965 - GH2
CAZyme HRGMv2_2449_120 HRGMv2_2449_120_56 69991 71838 - GH20
STP HRGMv2_2449_120 HRGMv2_2449_120_57 71939 73435 - SBP_bac_1
TC HRGMv2_2449_120 HRGMv2_2449_120_58 73453 74409 - 3.A.1.1.29
TC HRGMv2_2449_120 HRGMv2_2449_120_59 74426 75373 - 3.A.1.1.29
Gene ID: HRGMv2_2449_120_54
Type: TC
Location: 66159 - 67409 (+)
Gene ID: HRGMv2_2449_120_55
Type: CAZyme
Location: 67527 - 69965 (-)
Gene ID: HRGMv2_2449_120_56
Type: CAZyme
Location: 69991 - 71838 (-)
Gene ID: HRGMv2_2449_120_57
Type: STP
Location: 71939 - 73435 (-)
Gene ID: HRGMv2_2449_120_58
Type: TC
Location: 73453 - 74409 (-)
Gene ID: HRGMv2_2449_120_59
Type: TC
Location: 74426 - 75373 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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