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Cluster: HRGMv2_2449_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2449_81 HRGMv2_2449_81_1 2 1780 + 3.A.1.1.10
TC HRGMv2_2449_81 HRGMv2_2449_81_2 1864 2790 + 3.A.1.1.10
TC HRGMv2_2449_81 HRGMv2_2449_81_3 2802 3698 + 3.A.1.1.29
STP HRGMv2_2449_81 HRGMv2_2449_81_4 3864 5219 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_2449_81 HRGMv2_2449_81_5 5223 5657 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2449_81 HRGMv2_2449_81_6 5871 7175 + GH29
Gene ID: HRGMv2_2449_81_1
Type: TC
Location: 2 - 1780 (+)
Gene ID: HRGMv2_2449_81_2
Type: TC
Location: 1864 - 2790 (+)
Gene ID: HRGMv2_2449_81_3
Type: TC
Location: 2802 - 3698 (+)
Gene ID: HRGMv2_2449_81_4
Type: STP
Location: 3864 - 5219 (+)
Gene ID: HRGMv2_2449_81_5
Type:
Location: 5223 - 5657 (-)
Gene ID: HRGMv2_2449_81_6
Type: CAZyme
Location: 5871 - 7175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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