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Cluster: HRGMv2_2449_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2449_76 HRGMv2_2449_76_30 35743 38004 - GT35
TF HRGMv2_2449_76 HRGMv2_2449_76_31 38131 39021 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2449_76 HRGMv2_2449_76_32 39135 41183 - GH31_1
CAZyme HRGMv2_2449_76 HRGMv2_2449_76_33 41183 43168 - GH133
CAZyme HRGMv2_2449_76 HRGMv2_2449_76_34 43188 44756 - GH77
CAZyme HRGMv2_2449_76 HRGMv2_2449_76_35 44784 46784 - GH13_14
TC HRGMv2_2449_76 HRGMv2_2449_76_36 46842 47714 - 3.A.1.1.27
TC HRGMv2_2449_76 HRGMv2_2449_76_37 47717 49093 - 3.A.1.1.27
Gene ID: HRGMv2_2449_76_30
Type: CAZyme
Location: 35743 - 38004 (-)
Gene ID: HRGMv2_2449_76_31
Type: TF
Location: 38131 - 39021 (+)
Gene ID: HRGMv2_2449_76_32
Type: CAZyme
Location: 39135 - 41183 (-)
Gene ID: HRGMv2_2449_76_33
Type: CAZyme
Location: 41183 - 43168 (-)
Gene ID: HRGMv2_2449_76_34
Type: CAZyme
Location: 43188 - 44756 (-)
Gene ID: HRGMv2_2449_76_35
Type: CAZyme
Location: 44784 - 46784 (-)
Gene ID: HRGMv2_2449_76_36
Type: TC
Location: 46842 - 47714 (-)
Gene ID: HRGMv2_2449_76_37
Type: TC
Location: 47717 - 49093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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