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Cluster: HRGMv2_2449_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2449_68 HRGMv2_2449_68_7 9317 9946 - 9.B.28.1.2
TF HRGMv2_2449_68 HRGMv2_2449_68_8 9968 11038 - LacI
TC HRGMv2_2449_68 HRGMv2_2449_68_9 11457 12407 + 3.A.1.1.10
TC HRGMv2_2449_68 HRGMv2_2449_68_10 12420 13322 + 3.A.1.1.29
STP HRGMv2_2449_68 HRGMv2_2449_68_11 13417 15120 + SBP_bac_1
CAZyme HRGMv2_2449_68 HRGMv2_2449_68_12 15124 16617 + GH32
Gene ID: HRGMv2_2449_68_7
Type: TC
Location: 9317 - 9946 (-)
Gene ID: HRGMv2_2449_68_8
Type: TF
Location: 9968 - 11038 (-)
Gene ID: HRGMv2_2449_68_9
Type: TC
Location: 11457 - 12407 (+)
Gene ID: HRGMv2_2449_68_10
Type: TC
Location: 12420 - 13322 (+)
Gene ID: HRGMv2_2449_68_11
Type: STP
Location: 13417 - 15120 (+)
Gene ID: HRGMv2_2449_68_12
Type: CAZyme
Location: 15124 - 16617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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