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Cluster: HRGMv2_2448_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_72 92266 94032 - CBM34 | GH13_20
TC HRGMv2_2448_4 HRGMv2_2448_4_73 94054 96027 - 1.B.52.2.1
TC HRGMv2_2448_4 HRGMv2_2448_4_74 96059 96913 - 3.A.1.1.27
TC HRGMv2_2448_4 HRGMv2_2448_4_75 96910 98304 - 3.A.1.1.27
STP HRGMv2_2448_4 HRGMv2_2448_4_76 98403 99698 - SBP_bac_1
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_77 99818 102178 - GT35
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_78 102180 103679 - GH77
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_79 104071 105270 - GH26
Gene ID: HRGMv2_2448_4_72
Type: CAZyme
Location: 92266 - 94032 (-)
Gene ID: HRGMv2_2448_4_73
Type: TC
Location: 94054 - 96027 (-)
Gene ID: HRGMv2_2448_4_74
Type: TC
Location: 96059 - 96913 (-)
Gene ID: HRGMv2_2448_4_75
Type: TC
Location: 96910 - 98304 (-)
Gene ID: HRGMv2_2448_4_76
Type: STP
Location: 98403 - 99698 (-)
Gene ID: HRGMv2_2448_4_77
Type: CAZyme
Location: 99818 - 102178 (-)
Gene ID: HRGMv2_2448_4_78
Type: CAZyme
Location: 102180 - 103679 (-)
Gene ID: HRGMv2_2448_4_79
Type: CAZyme
Location: 104071 - 105270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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