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Cluster: HRGMv2_2448_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2448_4 HRGMv2_2448_4_54 65694 67721 - 1.B.52.2.1
pfam HRGMv2_2448_4 HRGMv2_2448_4_55 67870 69036 - Eno-Rase_FAD_bd | Enoyl_reductase | Eno-Rase_NADH_b
NULL(UNKNOWN) HRGMv2_2448_4 HRGMv2_2448_4_56 69026 69427 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_57 69592 72969 - CBM61 | CBM61 | GH53
CAZyme HRGMv2_2448_4 HRGMv2_2448_4_58 73102 75168 - GH35
TC HRGMv2_2448_4 HRGMv2_2448_4_59 75189 76031 - 3.A.1.1.6
TC HRGMv2_2448_4 HRGMv2_2448_4_60 76031 77353 - 3.A.1.1.6
TC HRGMv2_2448_4 HRGMv2_2448_4_61 77463 78722 - 3.A.1.1.22
TF HRGMv2_2448_4 HRGMv2_2448_4_62 78744 79763 - LacI
TC HRGMv2_2448_4 HRGMv2_2448_4_63 80084 80878 - 3.A.1.5.2
Gene ID: HRGMv2_2448_4_54
Type: TC
Location: 65694 - 67721 (-)
Gene ID: HRGMv2_2448_4_55
Type: pfam
Location: 67870 - 69036 (-)
Gene ID: HRGMv2_2448_4_56
Type:
Location: 69026 - 69427 (-)
Gene ID: HRGMv2_2448_4_57
Type: CAZyme
Location: 69592 - 72969 (-)
Gene ID: HRGMv2_2448_4_58
Type: CAZyme
Location: 73102 - 75168 (-)
Gene ID: HRGMv2_2448_4_59
Type: TC
Location: 75189 - 76031 (-)
Gene ID: HRGMv2_2448_4_60
Type: TC
Location: 76031 - 77353 (-)
Gene ID: HRGMv2_2448_4_61
Type: TC
Location: 77463 - 78722 (-)
Gene ID: HRGMv2_2448_4_62
Type: TF
Location: 78744 - 79763 (-)
Gene ID: HRGMv2_2448_4_63
Type: TC
Location: 80084 - 80878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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