Cluster: HRGMv2_2448_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2448
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2448_4 | HRGMv2_2448_4_16 | 15605 | 16939 | - | GH43_35 |
| CAZyme | HRGMv2_2448_4 | HRGMv2_2448_4_17 | 17022 | 18089 | - | GT2 |
| pfam | HRGMv2_2448_4 | HRGMv2_2448_4_18 | 18102 | 21047 | - | AMP-binding | PP-binding |
| TC | HRGMv2_2448_4 | HRGMv2_2448_4_19 | 21061 | 22797 | - | 3.A.1.109.2 |
| TC | HRGMv2_2448_4 | HRGMv2_2448_4_20 | 22784 | 24535 | - | 3.A.1.106.2 |
Gene ID: HRGMv2_2448_4_16
Type: CAZyme
Location: 15605 - 16939 (-)
Type: CAZyme
Location: 15605 - 16939 (-)
Gene ID: HRGMv2_2448_4_17
Type: CAZyme
Location: 17022 - 18089 (-)
Type: CAZyme
Location: 17022 - 18089 (-)
Gene ID: HRGMv2_2448_4_18
Type: pfam
Location: 18102 - 21047 (-)
Type: pfam
Location: 18102 - 21047 (-)
Gene ID: HRGMv2_2448_4_19
Type: TC
Location: 21061 - 22797 (-)
Type: TC
Location: 21061 - 22797 (-)
Gene ID: HRGMv2_2448_4_20
Type: TC
Location: 22784 - 24535 (-)
Type: TC
Location: 22784 - 24535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Cellulosilyticum
Species
Cellulosilyticum sp019418225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.