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Cluster: HRGMv2_2448_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2448_49 HRGMv2_2448_49_5 4833 6218 + 2.A.66.1.22
NULL(UNKNOWN) HRGMv2_2448_49 HRGMv2_2448_49_6 6339 6980 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2448_49 HRGMv2_2448_49_7 7278 8363 + 3.A.1.2.10
TC HRGMv2_2448_49 HRGMv2_2448_49_8 8601 9464 + 2.A.7.2.1
TF HRGMv2_2448_49 HRGMv2_2448_49_9 9546 10130 + HTH_3
CAZyme HRGMv2_2448_49 HRGMv2_2448_49_10 10393 12534 + CBM13 | CBM2 | GH30_8
NULL(UNKNOWN) HRGMv2_2448_49 HRGMv2_2448_49_11 12678 13922 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2448_49 HRGMv2_2448_49_12 14029 15381 - 2.A.66.1.32
Gene ID: HRGMv2_2448_49_5
Type: TC
Location: 4833 - 6218 (+)
Gene ID: HRGMv2_2448_49_6
Type:
Location: 6339 - 6980 (+)
Gene ID: HRGMv2_2448_49_7
Type: TC
Location: 7278 - 8363 (+)
Gene ID: HRGMv2_2448_49_8
Type: TC
Location: 8601 - 9464 (+)
Gene ID: HRGMv2_2448_49_9
Type: TF
Location: 9546 - 10130 (+)
Gene ID: HRGMv2_2448_49_10
Type: CAZyme
Location: 10393 - 12534 (+)
Gene ID: HRGMv2_2448_49_11
Type:
Location: 12678 - 13922 (+)
Gene ID: HRGMv2_2448_49_12
Type: TC
Location: 14029 - 15381 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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