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Cluster: HRGMv2_2448_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2448_34 HRGMv2_2448_34_3 1915 3051 - CE4
STP HRGMv2_2448_34 HRGMv2_2448_34_4 3401 4318 + TPR_1 | TPR_1 | TPR_1 | TPR_2
TC HRGMv2_2448_34 HRGMv2_2448_34_5 4410 5819 + 3.A.3.1.8
TC HRGMv2_2448_34 HRGMv2_2448_34_6 5770 7218 + 2.A.38.1.1
peptidase HRGMv2_2448_34 HRGMv2_2448_34_7 7284 8693 - C82.001
TC HRGMv2_2448_34 HRGMv2_2448_34_8 8835 10502 - 2.A.58.2.2
TC HRGMv2_2448_34 HRGMv2_2448_34_9 10726 12801 - 3.A.1.134.3
TC HRGMv2_2448_34 HRGMv2_2448_34_10 12791 13555 - 3.A.1.134.12
STP HRGMv2_2448_34 HRGMv2_2448_34_11 13662 14675 - HATPase_c
TF HRGMv2_2448_34 HRGMv2_2448_34_12 14672 15337 - Trans_reg_C
CAZyme HRGMv2_2448_34 HRGMv2_2448_34_13 15489 18386 - CBM26 | CBM26 | GH13_42
Gene ID: HRGMv2_2448_34_3
Type: CAZyme
Location: 1915 - 3051 (-)
Gene ID: HRGMv2_2448_34_4
Type: STP
Location: 3401 - 4318 (+)
Gene ID: HRGMv2_2448_34_5
Type: TC
Location: 4410 - 5819 (+)
Gene ID: HRGMv2_2448_34_6
Type: TC
Location: 5770 - 7218 (+)
Gene ID: HRGMv2_2448_34_7
Type: peptidase
Location: 7284 - 8693 (-)
Gene ID: HRGMv2_2448_34_8
Type: TC
Location: 8835 - 10502 (-)
Gene ID: HRGMv2_2448_34_9
Type: TC
Location: 10726 - 12801 (-)
Gene ID: HRGMv2_2448_34_10
Type: TC
Location: 12791 - 13555 (-)
Gene ID: HRGMv2_2448_34_11
Type: STP
Location: 13662 - 14675 (-)
Gene ID: HRGMv2_2448_34_12
Type: TF
Location: 14672 - 15337 (-)
Gene ID: HRGMv2_2448_34_13
Type: CAZyme
Location: 15489 - 18386 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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