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Cluster: HRGMv2_2448_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2448_30 HRGMv2_2448_30_1 345 2105 + 8.A.59.2.1
TF HRGMv2_2448_30 HRGMv2_2448_30_2 2130 3722 + 0035607 | 0036286
TC HRGMv2_2448_30 HRGMv2_2448_30_3 4089 5795 + 3.A.1.1.29
TC HRGMv2_2448_30 HRGMv2_2448_30_4 5908 6894 + 3.A.1.1.29
TC HRGMv2_2448_30 HRGMv2_2448_30_5 6907 7803 + 3.A.1.1.29
CAZyme HRGMv2_2448_30 HRGMv2_2448_30_6 7926 10085 + GH3
CAZyme HRGMv2_2448_30 HRGMv2_2448_30_7 10188 11738 + CBM91 | GH43_12
CAZyme HRGMv2_2448_30 HRGMv2_2448_30_8 11793 12914 + GH8
CAZyme HRGMv2_2448_30 HRGMv2_2448_30_9 12987 15005 + CE20 | CE20
Gene ID: HRGMv2_2448_30_1
Type: TC
Location: 345 - 2105 (+)
Gene ID: HRGMv2_2448_30_2
Type: TF
Location: 2130 - 3722 (+)
Gene ID: HRGMv2_2448_30_3
Type: TC
Location: 4089 - 5795 (+)
Gene ID: HRGMv2_2448_30_4
Type: TC
Location: 5908 - 6894 (+)
Gene ID: HRGMv2_2448_30_5
Type: TC
Location: 6907 - 7803 (+)
Gene ID: HRGMv2_2448_30_6
Type: CAZyme
Location: 7926 - 10085 (+)
Gene ID: HRGMv2_2448_30_7
Type: CAZyme
Location: 10188 - 11738 (+)
Gene ID: HRGMv2_2448_30_8
Type: CAZyme
Location: 11793 - 12914 (+)
Gene ID: HRGMv2_2448_30_9
Type: CAZyme
Location: 12987 - 15005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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