dbCAN Logo

Cluster: HRGMv2_2448_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2448_26 HRGMv2_2448_26_13 13856 14776 - 3.A.1.1.29
TC HRGMv2_2448_26 HRGMv2_2448_26_14 14793 15752 - 3.A.1.1.10
TF HRGMv2_2448_26 HRGMv2_2448_26_15 15945 17558 - HTH_AraC | HTH_AraC
TC HRGMv2_2448_26 HRGMv2_2448_26_16 17573 19354 - 8.A.59.2.1
STP HRGMv2_2448_26 HRGMv2_2448_26_17 19347 20687 - SBP_bac_1
TC HRGMv2_2448_26 HRGMv2_2448_26_18 20963 23572 - 3.A.9.1.2
NULL(UNKNOWN) HRGMv2_2448_26 HRGMv2_2448_26_19 23633 24283 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2448_26 HRGMv2_2448_26_20 24503 25285 + CE4
Gene ID: HRGMv2_2448_26_13
Type: TC
Location: 13856 - 14776 (-)
Gene ID: HRGMv2_2448_26_14
Type: TC
Location: 14793 - 15752 (-)
Gene ID: HRGMv2_2448_26_15
Type: TF
Location: 15945 - 17558 (-)
Gene ID: HRGMv2_2448_26_16
Type: TC
Location: 17573 - 19354 (-)
Gene ID: HRGMv2_2448_26_17
Type: STP
Location: 19347 - 20687 (-)
Gene ID: HRGMv2_2448_26_18
Type: TC
Location: 20963 - 23572 (-)
Gene ID: HRGMv2_2448_26_19
Type:
Location: 23633 - 24283 (-)
Gene ID: HRGMv2_2448_26_20
Type: CAZyme
Location: 24503 - 25285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List