Cluster: HRGMv2_2448_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2448
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2448_24 | HRGMv2_2448_24_20 | 25165 | 26061 | - | 3.A.1.149.1 |
| TF | HRGMv2_2448_24 | HRGMv2_2448_24_21 | 26063 | 26446 | - | GntR |
| CAZyme | HRGMv2_2448_24 | HRGMv2_2448_24_22 | 26633 | 27523 | + | GT2 |
| pfam | HRGMv2_2448_24 | HRGMv2_2448_24_23 | 27695 | 28726 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | HRGMv2_2448_24 | HRGMv2_2448_24_24 | 28723 | 29448 | - | 3.A.1.147.2 |
Gene ID: HRGMv2_2448_24_20
Type: TC
Location: 25165 - 26061 (-)
Type: TC
Location: 25165 - 26061 (-)
Gene ID: HRGMv2_2448_24_21
Type: TF
Location: 26063 - 26446 (-)
Type: TF
Location: 26063 - 26446 (-)
Gene ID: HRGMv2_2448_24_22
Type: CAZyme
Location: 26633 - 27523 (+)
Type: CAZyme
Location: 26633 - 27523 (+)
Gene ID: HRGMv2_2448_24_23
Type: pfam
Location: 27695 - 28726 (-)
Type: pfam
Location: 27695 - 28726 (-)
Gene ID: HRGMv2_2448_24_24
Type: TC
Location: 28723 - 29448 (-)
Type: TC
Location: 28723 - 29448 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Cellulosilyticum
Species
Cellulosilyticum sp019418225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.