Cluster: HRGMv2_2448_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2448
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2448_1 | HRGMv2_2448_1_116 | 147326 | 150871 | - | CBM26 | CBM26 | CBM26 | CBM26 | GH13_19 |
| CAZyme | HRGMv2_2448_1 | HRGMv2_2448_1_117 | 151346 | 155377 | + | GH74 |
| CAZyme | HRGMv2_2448_1 | HRGMv2_2448_1_118 | 155458 | 159210 | + | GH74 | GH74 |
| TC | HRGMv2_2448_1 | HRGMv2_2448_1_119 | 159448 | 161181 | + | 1.A.11.2.7 |
| pfam | HRGMv2_2448_1 | HRGMv2_2448_1_120 | 161428 | 164559 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | DUF5915 |
| TC | HRGMv2_2448_1 | HRGMv2_2448_1_121 | 165227 | 167215 | + | 1.B.52.2.2 |
Gene ID: HRGMv2_2448_1_116
Type: CAZyme
Location: 147326 - 150871 (-)
Type: CAZyme
Location: 147326 - 150871 (-)
Gene ID: HRGMv2_2448_1_117
Type: CAZyme
Location: 151346 - 155377 (+)
Type: CAZyme
Location: 151346 - 155377 (+)
Gene ID: HRGMv2_2448_1_118
Type: CAZyme
Location: 155458 - 159210 (+)
Type: CAZyme
Location: 155458 - 159210 (+)
Gene ID: HRGMv2_2448_1_119
Type: TC
Location: 159448 - 161181 (+)
Type: TC
Location: 159448 - 161181 (+)
Gene ID: HRGMv2_2448_1_120
Type: pfam
Location: 161428 - 164559 (-)
Type: pfam
Location: 161428 - 164559 (-)
Gene ID: HRGMv2_2448_1_121
Type: TC
Location: 165227 - 167215 (+)
Type: TC
Location: 165227 - 167215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Cellulosilyticum
Species
Cellulosilyticum sp019418225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.