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Cluster: HRGMv2_2448_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2448_17 HRGMv2_2448_17_51 40764 43199 - GH94
pfam HRGMv2_2448_17 HRGMv2_2448_17_52 43306 44205 - DUF4435
pfam HRGMv2_2448_17 HRGMv2_2448_17_53 44205 45359 - AAA_15 | AAA_21 | AAA_23
TC HRGMv2_2448_17 HRGMv2_2448_17_54 45561 46139 - 1.E.43.3.1
pfam HRGMv2_2448_17 HRGMv2_2448_17_55 46303 47688 - tRNA-synt_2 | tRNA_anti-codon
pfam HRGMv2_2448_17 HRGMv2_2448_17_56 48223 49008 - SpoU_methylase | MRM3-like_sub_bind
TC HRGMv2_2448_17 HRGMv2_2448_17_57 49001 49663 - 2.A.38.4.4
TC HRGMv2_2448_17 HRGMv2_2448_17_58 49677 51098 - 2.A.38.4.1
pfam HRGMv2_2448_17 HRGMv2_2448_17_59 51254 52225 - PFK
pfam HRGMv2_2448_17 HRGMv2_2448_17_60 52412 55864 - tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger
CAZyme HRGMv2_2448_17 HRGMv2_2448_17_61 56140 58497 - GH31_1
pfam HRGMv2_2448_17 HRGMv2_2448_17_62 58693 61119 - tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta
pfam HRGMv2_2448_17 HRGMv2_2448_17_63 61142 62161 - tRNA-synt_2d | Phe_tRNA-synt_N
CAZyme HRGMv2_2448_17 HRGMv2_2448_17_64 62626 64203 - GH5_1
CAZyme HRGMv2_2448_17 HRGMv2_2448_17_65 64414 65649 - CBM3
Gene ID: HRGMv2_2448_17_51
Type: CAZyme
Location: 40764 - 43199 (-)
Gene ID: HRGMv2_2448_17_52
Type: pfam
Location: 43306 - 44205 (-)
Gene ID: HRGMv2_2448_17_53
Type: pfam
Location: 44205 - 45359 (-)
Gene ID: HRGMv2_2448_17_54
Type: TC
Location: 45561 - 46139 (-)
Gene ID: HRGMv2_2448_17_55
Type: pfam
Location: 46303 - 47688 (-)
Gene ID: HRGMv2_2448_17_56
Type: pfam
Location: 48223 - 49008 (-)
Gene ID: HRGMv2_2448_17_57
Type: TC
Location: 49001 - 49663 (-)
Gene ID: HRGMv2_2448_17_58
Type: TC
Location: 49677 - 51098 (-)
Gene ID: HRGMv2_2448_17_59
Type: pfam
Location: 51254 - 52225 (-)
Gene ID: HRGMv2_2448_17_60
Type: pfam
Location: 52412 - 55864 (-)
Gene ID: HRGMv2_2448_17_61
Type: CAZyme
Location: 56140 - 58497 (-)
Gene ID: HRGMv2_2448_17_62
Type: pfam
Location: 58693 - 61119 (-)
Gene ID: HRGMv2_2448_17_63
Type: pfam
Location: 61142 - 62161 (-)
Gene ID: HRGMv2_2448_17_64
Type: CAZyme
Location: 62626 - 64203 (-)
Gene ID: HRGMv2_2448_17_65
Type: CAZyme
Location: 64414 - 65649 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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