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Cluster: HRGMv2_2448_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2448_12 HRGMv2_2448_12_77 83480 85432 - GH9
TC HRGMv2_2448_12 HRGMv2_2448_12_78 85709 87109 - 2.A.25.1.4
pfam HRGMv2_2448_12 HRGMv2_2448_12_79 87694 88836 - Metallophos | Metallophos_2
NULL(UNKNOWN) HRGMv2_2448_12 HRGMv2_2448_12_80 88960 89736 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2448_12 HRGMv2_2448_12_81 89730 90428 - 3.A.1.132.6
Gene ID: HRGMv2_2448_12_77
Type: CAZyme
Location: 83480 - 85432 (-)
Gene ID: HRGMv2_2448_12_78
Type: TC
Location: 85709 - 87109 (-)
Gene ID: HRGMv2_2448_12_79
Type: pfam
Location: 87694 - 88836 (-)
Gene ID: HRGMv2_2448_12_80
Type:
Location: 88960 - 89736 (-)
Gene ID: HRGMv2_2448_12_81
Type: TC
Location: 89730 - 90428 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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