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Cluster: HRGMv2_2448_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2448_9 HRGMv2_2448_9_93 80522 82198 - 3.A.1.112.9
CAZyme HRGMv2_2448_9 HRGMv2_2448_9_94 82363 83412 + GT2
pfam HRGMv2_2448_9 HRGMv2_2448_9_95 83445 84557 + PS_pyruv_trans
TC HRGMv2_2448_9 HRGMv2_2448_9_96 84562 86109 + 2.A.66.1.40
STP HRGMv2_2448_9 HRGMv2_2448_9_97 86106 87317 + Fer4
TC HRGMv2_2448_9 HRGMv2_2448_9_98 87387 88001 + 9.B.18.1.3
pfam HRGMv2_2448_9 HRGMv2_2448_9_99 88030 89856 + Glycos_transf_1 | Glycos_transf_2 | Glyco_trans_1_4
pfam HRGMv2_2448_9 HRGMv2_2448_9_100 89843 91021 + Wzy_C
CAZyme HRGMv2_2448_9 HRGMv2_2448_9_101 91023 91922 + GT2
pfam HRGMv2_2448_9 HRGMv2_2448_9_102 91938 92522 + Hexapep
pfam HRGMv2_2448_9 HRGMv2_2448_9_103 92544 93305 + Wzz
TC HRGMv2_2448_9 HRGMv2_2448_9_104 93274 93948 + 8.A.3.2.1
pfam HRGMv2_2448_9 HRGMv2_2448_9_105 93966 94511 + Hexapep | Hexapep_2
CAZyme HRGMv2_2448_9 HRGMv2_2448_9_106 94504 96171 + GT2
pfam HRGMv2_2448_9 HRGMv2_2448_9_107 96275 99904 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_2448_9 HRGMv2_2448_9_108 100023 100994 + GT2
pfam HRGMv2_2448_9 HRGMv2_2448_9_109 101019 102242 - NTP_transf_5
pfam HRGMv2_2448_9 HRGMv2_2448_9_110 102269 103183 - Metallophos
TC HRGMv2_2448_9 HRGMv2_2448_9_111 103265 104332 - 9.B.97.1.2
TC HRGMv2_2448_9 HRGMv2_2448_9_112 104368 106053 - 3.A.1.106.14
TC HRGMv2_2448_9 HRGMv2_2448_9_113 106181 108796 + 9.B.144.1.5
Gene ID: HRGMv2_2448_9_93
Type: TC
Location: 80522 - 82198 (-)
Gene ID: HRGMv2_2448_9_94
Type: CAZyme
Location: 82363 - 83412 (+)
Gene ID: HRGMv2_2448_9_95
Type: pfam
Location: 83445 - 84557 (+)
Gene ID: HRGMv2_2448_9_96
Type: TC
Location: 84562 - 86109 (+)
Gene ID: HRGMv2_2448_9_97
Type: STP
Location: 86106 - 87317 (+)
Gene ID: HRGMv2_2448_9_98
Type: TC
Location: 87387 - 88001 (+)
Gene ID: HRGMv2_2448_9_99
Type: pfam
Location: 88030 - 89856 (+)
Gene ID: HRGMv2_2448_9_100
Type: pfam
Location: 89843 - 91021 (+)
Gene ID: HRGMv2_2448_9_101
Type: CAZyme
Location: 91023 - 91922 (+)
Gene ID: HRGMv2_2448_9_102
Type: pfam
Location: 91938 - 92522 (+)
Gene ID: HRGMv2_2448_9_103
Type: pfam
Location: 92544 - 93305 (+)
Gene ID: HRGMv2_2448_9_104
Type: TC
Location: 93274 - 93948 (+)
Gene ID: HRGMv2_2448_9_105
Type: pfam
Location: 93966 - 94511 (+)
Gene ID: HRGMv2_2448_9_106
Type: CAZyme
Location: 94504 - 96171 (+)
Gene ID: HRGMv2_2448_9_107
Type: pfam
Location: 96275 - 99904 (-)
Gene ID: HRGMv2_2448_9_108
Type: CAZyme
Location: 100023 - 100994 (+)
Gene ID: HRGMv2_2448_9_109
Type: pfam
Location: 101019 - 102242 (-)
Gene ID: HRGMv2_2448_9_110
Type: pfam
Location: 102269 - 103183 (-)
Gene ID: HRGMv2_2448_9_111
Type: TC
Location: 103265 - 104332 (-)
Gene ID: HRGMv2_2448_9_112
Type: TC
Location: 104368 - 106053 (-)
Gene ID: HRGMv2_2448_9_113
Type: TC
Location: 106181 - 108796 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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