Cluster: HRGMv2_2448_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2448
- CGC Family ID: CGCFAM_00586
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2448_7 | HRGMv2_2448_7_82 | 98310 | 99662 | + | 3.A.1.1.21 |
| TC | HRGMv2_2448_7 | HRGMv2_2448_7_83 | 99870 | 100796 | + | 3.A.1.1.34 |
| TC | HRGMv2_2448_7 | HRGMv2_2448_7_84 | 100789 | 101637 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2448_7 | HRGMv2_2448_7_85 | 101660 | 102739 | + | CE17 |
| CAZyme | HRGMv2_2448_7 | HRGMv2_2448_7_86 | 102835 | 103857 | + | GH130_2 |
| pfam | HRGMv2_2448_7 | HRGMv2_2448_7_87 | 103957 | 105159 | + | GlcNAc_2-epim |
| CAZyme | HRGMv2_2448_7 | HRGMv2_2448_7_88 | 105152 | 106318 | + | GH130_1 |
Gene ID: HRGMv2_2448_7_82
Type: TC
Location: 98310 - 99662 (+)
Type: TC
Location: 98310 - 99662 (+)
Gene ID: HRGMv2_2448_7_83
Type: TC
Location: 99870 - 100796 (+)
Type: TC
Location: 99870 - 100796 (+)
Gene ID: HRGMv2_2448_7_84
Type: TC
Location: 100789 - 101637 (+)
Type: TC
Location: 100789 - 101637 (+)
Gene ID: HRGMv2_2448_7_85
Type: CAZyme
Location: 101660 - 102739 (+)
Type: CAZyme
Location: 101660 - 102739 (+)
Gene ID: HRGMv2_2448_7_86
Type: CAZyme
Location: 102835 - 103857 (+)
Type: CAZyme
Location: 102835 - 103857 (+)
Gene ID: HRGMv2_2448_7_87
Type: pfam
Location: 103957 - 105159 (+)
Type: pfam
Location: 103957 - 105159 (+)
Gene ID: HRGMv2_2448_7_88
Type: CAZyme
Location: 105152 - 106318 (+)
Type: CAZyme
Location: 105152 - 106318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Cellulosilyticum
Species
Cellulosilyticum sp019418225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.