Cluster: HRGMv2_2447_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_22 | HRGMv2_2447_22_74 | 103016 | 103906 | + | 3.A.1.1.42 |
| TC | HRGMv2_2447_22 | HRGMv2_2447_22_75 | 103906 | 104760 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2447_22 | HRGMv2_2447_22_76 | 104811 | 106913 | + | GH36 |
| CAZyme | HRGMv2_2447_22 | HRGMv2_2447_22_77 | 107020 | 111933 | + | CBM35 | CBM35 | GH39 |
| NULL(UNKNOWN) | HRGMv2_2447_22 | HRGMv2_2447_22_78 | 112007 | 112438 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2447_22 | HRGMv2_2447_22_79 | 112592 | 113935 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_2447_22_74
Type: TC
Location: 103016 - 103906 (+)
Type: TC
Location: 103016 - 103906 (+)
Gene ID: HRGMv2_2447_22_75
Type: TC
Location: 103906 - 104760 (+)
Type: TC
Location: 103906 - 104760 (+)
Gene ID: HRGMv2_2447_22_76
Type: CAZyme
Location: 104811 - 106913 (+)
Type: CAZyme
Location: 104811 - 106913 (+)
Gene ID: HRGMv2_2447_22_77
Type: CAZyme
Location: 107020 - 111933 (+)
Type: CAZyme
Location: 107020 - 111933 (+)
Gene ID: HRGMv2_2447_22_78
Type:
Location: 112007 - 112438 (-)
Type:
Location: 112007 - 112438 (-)
Gene ID: HRGMv2_2447_22_79
Type: TC
Location: 112592 - 113935 (+)
Type: TC
Location: 112592 - 113935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.