Cluster: HRGMv2_2447_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- CGC Family ID: CGCFAM_03624
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2447_22 | HRGMv2_2447_22_11 | 10861 | 16101 | + | GH146 |
| STP | HRGMv2_2447_22 | HRGMv2_2447_22_12 | 16363 | 17418 | + | HATPase_c | HisKA |
| TF | HRGMv2_2447_22 | HRGMv2_2447_22_13 | 17411 | 18103 | + | Trans_reg_C |
| TC | HRGMv2_2447_22 | HRGMv2_2447_22_14 | 18264 | 19649 | + | 2.A.38.4.1 |
| TC | HRGMv2_2447_22 | HRGMv2_2447_22_15 | 19716 | 20372 | + | 2.A.38.4.4 |
Gene ID: HRGMv2_2447_22_11
Type: CAZyme
Location: 10861 - 16101 (+)
Type: CAZyme
Location: 10861 - 16101 (+)
Gene ID: HRGMv2_2447_22_12
Type: STP
Location: 16363 - 17418 (+)
Type: STP
Location: 16363 - 17418 (+)
Gene ID: HRGMv2_2447_22_13
Type: TF
Location: 17411 - 18103 (+)
Type: TF
Location: 17411 - 18103 (+)
Gene ID: HRGMv2_2447_22_14
Type: TC
Location: 18264 - 19649 (+)
Type: TC
Location: 18264 - 19649 (+)
Gene ID: HRGMv2_2447_22_15
Type: TC
Location: 19716 - 20372 (+)
Type: TC
Location: 19716 - 20372 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.