Cluster: HRGMv2_2447_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2447
- CGC Family ID: CGCFAM_01513
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_10 | HRGMv2_2447_10_19 | 14595 | 15965 | + | 2.A.66.1.25 |
| NULL(UNKNOWN) | HRGMv2_2447_10 | HRGMv2_2447_10_20 | 16046 | 17893 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2447_10 | HRGMv2_2447_10_21 | 17924 | 19849 | - | GT2 |
| CAZyme | HRGMv2_2447_10 | HRGMv2_2447_10_22 | 19854 | 21011 | - | GT2 |
| TC | HRGMv2_2447_10 | HRGMv2_2447_10_23 | 21018 | 22766 | - | 9.B.34.1.4 |
Gene ID: HRGMv2_2447_10_19
Type: TC
Location: 14595 - 15965 (+)
Type: TC
Location: 14595 - 15965 (+)
Gene ID: HRGMv2_2447_10_20
Type:
Location: 16046 - 17893 (-)
Type:
Location: 16046 - 17893 (-)
Gene ID: HRGMv2_2447_10_21
Type: CAZyme
Location: 17924 - 19849 (-)
Type: CAZyme
Location: 17924 - 19849 (-)
Gene ID: HRGMv2_2447_10_22
Type: CAZyme
Location: 19854 - 21011 (-)
Type: CAZyme
Location: 19854 - 21011 (-)
Gene ID: HRGMv2_2447_10_23
Type: TC
Location: 21018 - 22766 (-)
Type: TC
Location: 21018 - 22766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.