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Cluster: HRGMv2_2447_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2447_67 HRGMv2_2447_67_65 88003 89445 + 8.A.3.1.2
TC HRGMv2_2447_67 HRGMv2_2447_67_66 89438 90946 + 8.A.3.1.2
pfam HRGMv2_2447_67 HRGMv2_2447_67_67 90959 92149 + LytR_cpsA_psr
NULL(UNKNOWN) HRGMv2_2447_67 HRGMv2_2447_67_68 92210 92422 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2447_67 HRGMv2_2447_67_69 92456 94330 + 9.B.18.2.1
TC HRGMv2_2447_67 HRGMv2_2447_67_70 94351 95049 + 9.B.18.1.2
pfam HRGMv2_2447_67 HRGMv2_2447_67_71 95108 95935 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10
pfam HRGMv2_2447_67 HRGMv2_2447_67_72 95966 96358 + Glyco_transf_4 | Glyco_trans_4_2
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_73 96316 97104 + GT4
TC HRGMv2_2447_67 HRGMv2_2447_67_74 97098 98192 + 9.B.183.1.9
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_75 98208 99260 + GT2
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_76 99262 100086 + GT2
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_77 100106 101230 + GT4
pfam HRGMv2_2447_67 HRGMv2_2447_67_78 101290 101958 + DUF1919
pfam HRGMv2_2447_67 HRGMv2_2447_67_79 101982 102959 + Glycos_transf_2
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_80 103009 103977 + GT2
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_81 104020 104907 + GT2
pfam HRGMv2_2447_67 HRGMv2_2447_67_82 104904 105899 + DUF6625
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_83 105896 106867 + GT2
pfam HRGMv2_2447_67 HRGMv2_2447_67_84 106884 108044 + PS_pyruv_trans
pfam HRGMv2_2447_67 HRGMv2_2447_67_85 108063 109583 + Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_86 109802 110848 + GT2
pfam HRGMv2_2447_67 HRGMv2_2447_67_87 110845 111945 + PS_pyruv_trans
pfam HRGMv2_2447_67 HRGMv2_2447_67_88 111989 113164 + FrhB_FdhB_C | Fer4_7
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_89 113364 114452 + GT2
STP HRGMv2_2447_67 HRGMv2_2447_67_90 114520 115677 + Fer4
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_91 115693 116574 + GT12
Gene ID: HRGMv2_2447_67_65
Type: TC
Location: 88003 - 89445 (+)
Gene ID: HRGMv2_2447_67_66
Type: TC
Location: 89438 - 90946 (+)
Gene ID: HRGMv2_2447_67_67
Type: pfam
Location: 90959 - 92149 (+)
Gene ID: HRGMv2_2447_67_68
Type:
Location: 92210 - 92422 (+)
Gene ID: HRGMv2_2447_67_69
Type: TC
Location: 92456 - 94330 (+)
Gene ID: HRGMv2_2447_67_70
Type: TC
Location: 94351 - 95049 (+)
Gene ID: HRGMv2_2447_67_71
Type: pfam
Location: 95108 - 95935 (+)
Gene ID: HRGMv2_2447_67_72
Type: pfam
Location: 95966 - 96358 (+)
Gene ID: HRGMv2_2447_67_73
Type: CAZyme
Location: 96316 - 97104 (+)
Gene ID: HRGMv2_2447_67_74
Type: TC
Location: 97098 - 98192 (+)
Gene ID: HRGMv2_2447_67_75
Type: CAZyme
Location: 98208 - 99260 (+)
Gene ID: HRGMv2_2447_67_76
Type: CAZyme
Location: 99262 - 100086 (+)
Gene ID: HRGMv2_2447_67_77
Type: CAZyme
Location: 100106 - 101230 (+)
Gene ID: HRGMv2_2447_67_78
Type: pfam
Location: 101290 - 101958 (+)
Gene ID: HRGMv2_2447_67_79
Type: pfam
Location: 101982 - 102959 (+)
Gene ID: HRGMv2_2447_67_80
Type: CAZyme
Location: 103009 - 103977 (+)
Gene ID: HRGMv2_2447_67_81
Type: CAZyme
Location: 104020 - 104907 (+)
Gene ID: HRGMv2_2447_67_82
Type: pfam
Location: 104904 - 105899 (+)
Gene ID: HRGMv2_2447_67_83
Type: CAZyme
Location: 105896 - 106867 (+)
Gene ID: HRGMv2_2447_67_84
Type: pfam
Location: 106884 - 108044 (+)
Gene ID: HRGMv2_2447_67_85
Type: pfam
Location: 108063 - 109583 (+)
Gene ID: HRGMv2_2447_67_86
Type: CAZyme
Location: 109802 - 110848 (+)
Gene ID: HRGMv2_2447_67_87
Type: pfam
Location: 110845 - 111945 (+)
Gene ID: HRGMv2_2447_67_88
Type: pfam
Location: 111989 - 113164 (+)
Gene ID: HRGMv2_2447_67_89
Type: CAZyme
Location: 113364 - 114452 (+)
Gene ID: HRGMv2_2447_67_90
Type: STP
Location: 114520 - 115677 (+)
Gene ID: HRGMv2_2447_67_91
Type: CAZyme
Location: 115693 - 116574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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