dbCAN Logo

Cluster: HRGMv2_2447_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2447_67 HRGMv2_2447_67_7 5682 7028 - 2.A.66.1.32
pfam HRGMv2_2447_67 HRGMv2_2447_67_8 7341 8201 + YitT_membrane | DUF2179
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_9 8463 13796 + CBM32 | GH95
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_10 13941 17258 + GH146
STP HRGMv2_2447_67 HRGMv2_2447_67_11 17532 18815 + SBP_bac_1
TC HRGMv2_2447_67 HRGMv2_2447_67_12 18817 20634 + 8.A.59.2.1
TF HRGMv2_2447_67 HRGMv2_2447_67_13 20609 22183 + HTH_AraC
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_14 22323 26270 + GH141
CAZyme HRGMv2_2447_67 HRGMv2_2447_67_15 26661 28121 + GH43_27
pfam HRGMv2_2447_67 HRGMv2_2447_67_16 28408 29844 + UPF0236
TC HRGMv2_2447_67 HRGMv2_2447_67_17 30075 30926 + 3.A.1.26.7
TC HRGMv2_2447_67 HRGMv2_2447_67_18 30911 31759 + 3.A.1.26.7
TC HRGMv2_2447_67 HRGMv2_2447_67_19 31752 32576 + 3.A.1.26.7
pfam HRGMv2_2447_67 HRGMv2_2447_67_20 32624 33364 + PseudoU_synth_1 | PseudoU_synth_1
sulfatase HRGMv2_2447_67 HRGMv2_2447_67_21 33625 34356 + S1_9
TC HRGMv2_2447_67 HRGMv2_2447_67_22 34439 35227 + 9.B.158.1.1
Gene ID: HRGMv2_2447_67_7
Type: TC
Location: 5682 - 7028 (-)
Gene ID: HRGMv2_2447_67_8
Type: pfam
Location: 7341 - 8201 (+)
Gene ID: HRGMv2_2447_67_9
Type: CAZyme
Location: 8463 - 13796 (+)
Gene ID: HRGMv2_2447_67_10
Type: CAZyme
Location: 13941 - 17258 (+)
Gene ID: HRGMv2_2447_67_11
Type: STP
Location: 17532 - 18815 (+)
Gene ID: HRGMv2_2447_67_12
Type: TC
Location: 18817 - 20634 (+)
Gene ID: HRGMv2_2447_67_13
Type: TF
Location: 20609 - 22183 (+)
Gene ID: HRGMv2_2447_67_14
Type: CAZyme
Location: 22323 - 26270 (+)
Gene ID: HRGMv2_2447_67_15
Type: CAZyme
Location: 26661 - 28121 (+)
Gene ID: HRGMv2_2447_67_16
Type: pfam
Location: 28408 - 29844 (+)
Gene ID: HRGMv2_2447_67_17
Type: TC
Location: 30075 - 30926 (+)
Gene ID: HRGMv2_2447_67_18
Type: TC
Location: 30911 - 31759 (+)
Gene ID: HRGMv2_2447_67_19
Type: TC
Location: 31752 - 32576 (+)
Gene ID: HRGMv2_2447_67_20
Type: pfam
Location: 32624 - 33364 (+)
Gene ID: HRGMv2_2447_67_21
Type: sulfatase
Location: 33625 - 34356 (+)
Gene ID: HRGMv2_2447_67_22
Type: TC
Location: 34439 - 35227 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List