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Cluster: HRGMv2_2447_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2447_66 HRGMv2_2447_66_7 6225 6905 - 3.A.1.1.22
pfam HRGMv2_2447_66 HRGMv2_2447_66_8 7098 8864 + DUF885
pfam HRGMv2_2447_66 HRGMv2_2447_66_9 8868 9398 + Gate
TC HRGMv2_2447_66 HRGMv2_2447_66_10 9418 10029 + 9.B.156.3.1
TF HRGMv2_2447_66 HRGMv2_2447_66_11 10167 10409 + HTH_3
pfam HRGMv2_2447_66 HRGMv2_2447_66_12 10685 12574 - DUF975 | ABC_trans_CmpB
CAZyme HRGMv2_2447_66 HRGMv2_2447_66_13 12905 14566 - GH13_29
TC HRGMv2_2447_66 HRGMv2_2447_66_14 14614 16602 - 4.A.1.2.13
TF HRGMv2_2447_66 HRGMv2_2447_66_15 16790 17563 + GntR
CAZyme HRGMv2_2447_66 HRGMv2_2447_66_16 17638 18558 - GT2
Gene ID: HRGMv2_2447_66_7
Type: TC
Location: 6225 - 6905 (-)
Gene ID: HRGMv2_2447_66_8
Type: pfam
Location: 7098 - 8864 (+)
Gene ID: HRGMv2_2447_66_9
Type: pfam
Location: 8868 - 9398 (+)
Gene ID: HRGMv2_2447_66_10
Type: TC
Location: 9418 - 10029 (+)
Gene ID: HRGMv2_2447_66_11
Type: TF
Location: 10167 - 10409 (+)
Gene ID: HRGMv2_2447_66_12
Type: pfam
Location: 10685 - 12574 (-)
Gene ID: HRGMv2_2447_66_13
Type: CAZyme
Location: 12905 - 14566 (-)
Gene ID: HRGMv2_2447_66_14
Type: TC
Location: 14614 - 16602 (-)
Gene ID: HRGMv2_2447_66_15
Type: TF
Location: 16790 - 17563 (+)
Gene ID: HRGMv2_2447_66_16
Type: CAZyme
Location: 17638 - 18558 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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