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Cluster: HRGMv2_2447_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2447_62 HRGMv2_2447_62_64 71121 72065 + 2.A.69.3.2
NULL(UNKNOWN) HRGMv2_2447_62 HRGMv2_2447_62_65 72219 73931 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_66 74101 76128 - GH31_1
TC HRGMv2_2447_62 HRGMv2_2447_62_67 76429 77955 + 8.A.59.2.1
TC HRGMv2_2447_62 HRGMv2_2447_62_68 77995 79017 + 3.A.1.2.14
TF HRGMv2_2447_62 HRGMv2_2447_62_69 79036 80679 + HTH_AraC | HTH_AraC
TF HRGMv2_2447_62 HRGMv2_2447_62_70 80685 81770 - GntR
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_71 82286 86962 + GH43_22
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_72 87176 92311 + GH43_22 | GH43_34
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_73 92525 97642 + GH43_22 | GH43_34
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_74 97673 104005 + GH43_22 | GH43_27
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_75 104165 109540 + GH43_26
CAZyme HRGMv2_2447_62 HRGMv2_2447_62_76 109551 111488 + GH43_29
pfam HRGMv2_2447_62 HRGMv2_2447_62_77 111522 114671 + Big_2 | Big_2 | Laminin_G_3 | Laminin_G_3 | aBig_2
TC HRGMv2_2447_62 HRGMv2_2447_62_78 115172 116173 + 3.A.1.2.1
TC HRGMv2_2447_62 HRGMv2_2447_62_79 116280 117797 + 3.A.1.2.23
TC HRGMv2_2447_62 HRGMv2_2447_62_80 117797 118903 + 3.A.1.2.23
TC HRGMv2_2447_62 HRGMv2_2447_62_81 118905 119951 + 3.A.1.2.14
Gene ID: HRGMv2_2447_62_64
Type: TC
Location: 71121 - 72065 (+)
Gene ID: HRGMv2_2447_62_65
Type:
Location: 72219 - 73931 (+)
Gene ID: HRGMv2_2447_62_66
Type: CAZyme
Location: 74101 - 76128 (-)
Gene ID: HRGMv2_2447_62_67
Type: TC
Location: 76429 - 77955 (+)
Gene ID: HRGMv2_2447_62_68
Type: TC
Location: 77995 - 79017 (+)
Gene ID: HRGMv2_2447_62_69
Type: TF
Location: 79036 - 80679 (+)
Gene ID: HRGMv2_2447_62_70
Type: TF
Location: 80685 - 81770 (-)
Gene ID: HRGMv2_2447_62_71
Type: CAZyme
Location: 82286 - 86962 (+)
Gene ID: HRGMv2_2447_62_72
Type: CAZyme
Location: 87176 - 92311 (+)
Gene ID: HRGMv2_2447_62_73
Type: CAZyme
Location: 92525 - 97642 (+)
Gene ID: HRGMv2_2447_62_74
Type: CAZyme
Location: 97673 - 104005 (+)
Gene ID: HRGMv2_2447_62_75
Type: CAZyme
Location: 104165 - 109540 (+)
Gene ID: HRGMv2_2447_62_76
Type: CAZyme
Location: 109551 - 111488 (+)
Gene ID: HRGMv2_2447_62_77
Type: pfam
Location: 111522 - 114671 (+)
Gene ID: HRGMv2_2447_62_78
Type: TC
Location: 115172 - 116173 (+)
Gene ID: HRGMv2_2447_62_79
Type: TC
Location: 116280 - 117797 (+)
Gene ID: HRGMv2_2447_62_80
Type: TC
Location: 117797 - 118903 (+)
Gene ID: HRGMv2_2447_62_81
Type: TC
Location: 118905 - 119951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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