Cluster: HRGMv2_2447_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_62 | HRGMv2_2447_62_10 | 14744 | 16630 | + | 3.A.3.6.10 |
| NULL(UNKNOWN) | HRGMv2_2447_62 | HRGMv2_2447_62_11 | 16875 | 17225 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2447_62 | HRGMv2_2447_62_12 | 17569 | 18408 | + | PRD | PRD | CAT_RBD |
| TC | HRGMv2_2447_62 | HRGMv2_2447_62_13 | 18563 | 20464 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_2447_62 | HRGMv2_2447_62_14 | 20490 | 21965 | + | GH1 |
Gene ID: HRGMv2_2447_62_10
Type: TC
Location: 14744 - 16630 (+)
Type: TC
Location: 14744 - 16630 (+)
Gene ID: HRGMv2_2447_62_11
Type:
Location: 16875 - 17225 (-)
Type:
Location: 16875 - 17225 (-)
Gene ID: HRGMv2_2447_62_12
Type: pfam
Location: 17569 - 18408 (+)
Type: pfam
Location: 17569 - 18408 (+)
Gene ID: HRGMv2_2447_62_13
Type: TC
Location: 18563 - 20464 (+)
Type: TC
Location: 18563 - 20464 (+)
Gene ID: HRGMv2_2447_62_14
Type: CAZyme
Location: 20490 - 21965 (+)
Type: CAZyme
Location: 20490 - 21965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.