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Cluster: HRGMv2_2447_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2447_60 HRGMv2_2447_60_40 49211 50848 - GH13_31
CAZyme HRGMv2_2447_60 HRGMv2_2447_60_41 50914 52668 - CBM34 | GH13_20
CAZyme HRGMv2_2447_60 HRGMv2_2447_60_42 52643 54682 - GH133
CAZyme HRGMv2_2447_60 HRGMv2_2447_60_43 54679 56748 - GH13_14
TC HRGMv2_2447_60 HRGMv2_2447_60_44 56905 57777 - 3.A.1.1.27
TC HRGMv2_2447_60 HRGMv2_2447_60_45 57780 59159 - 3.A.1.1.27
TC HRGMv2_2447_60 HRGMv2_2447_60_46 59176 60411 - 3.A.1.1.2
TF HRGMv2_2447_60 HRGMv2_2447_60_47 60723 61772 + LacI
pfam HRGMv2_2447_60 HRGMv2_2447_60_48 61864 62721 + CN_hydrolase
TC HRGMv2_2447_60 HRGMv2_2447_60_49 63426 64337 - 1.A.35.3.2
Gene ID: HRGMv2_2447_60_40
Type: CAZyme
Location: 49211 - 50848 (-)
Gene ID: HRGMv2_2447_60_41
Type: CAZyme
Location: 50914 - 52668 (-)
Gene ID: HRGMv2_2447_60_42
Type: CAZyme
Location: 52643 - 54682 (-)
Gene ID: HRGMv2_2447_60_43
Type: CAZyme
Location: 54679 - 56748 (-)
Gene ID: HRGMv2_2447_60_44
Type: TC
Location: 56905 - 57777 (-)
Gene ID: HRGMv2_2447_60_45
Type: TC
Location: 57780 - 59159 (-)
Gene ID: HRGMv2_2447_60_46
Type: TC
Location: 59176 - 60411 (-)
Gene ID: HRGMv2_2447_60_47
Type: TF
Location: 60723 - 61772 (+)
Gene ID: HRGMv2_2447_60_48
Type: pfam
Location: 61864 - 62721 (+)
Gene ID: HRGMv2_2447_60_49
Type: TC
Location: 63426 - 64337 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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