Cluster: HRGMv2_2447_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_57 | HRGMv2_2447_57_1 | 3 | 1916 | - | 4.A.2.1.17 |
| TF | HRGMv2_2447_57 | HRGMv2_2447_57_2 | 2006 | 3235 | - | HTH_AraC |
| CAZyme | HRGMv2_2447_57 | HRGMv2_2447_57_3 | 3471 | 4481 | + | GH43_17 |
Gene ID: HRGMv2_2447_57_1
Type: TC
Location: 3 - 1916 (-)
Type: TC
Location: 3 - 1916 (-)
Gene ID: HRGMv2_2447_57_2
Type: TF
Location: 2006 - 3235 (-)
Type: TF
Location: 2006 - 3235 (-)
Gene ID: HRGMv2_2447_57_3
Type: CAZyme
Location: 3471 - 4481 (+)
Type: CAZyme
Location: 3471 - 4481 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.