Cluster: HRGMv2_2447_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2447_52 | HRGMv2_2447_52_5 | 3502 | 5628 | - | GH13_4 |
| CAZyme | HRGMv2_2447_52 | HRGMv2_2447_52_6 | 5647 | 7830 | - | GH36 |
| TC | HRGMv2_2447_52 | HRGMv2_2447_52_7 | 8024 | 8866 | - | 3.A.1.1.28 |
| TC | HRGMv2_2447_52 | HRGMv2_2447_52_8 | 8866 | 9738 | - | 3.A.1.1.28 |
| TC | HRGMv2_2447_52 | HRGMv2_2447_52_9 | 9757 | 11040 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2447_52_5
Type: CAZyme
Location: 3502 - 5628 (-)
Type: CAZyme
Location: 3502 - 5628 (-)
Gene ID: HRGMv2_2447_52_6
Type: CAZyme
Location: 5647 - 7830 (-)
Type: CAZyme
Location: 5647 - 7830 (-)
Gene ID: HRGMv2_2447_52_7
Type: TC
Location: 8024 - 8866 (-)
Type: TC
Location: 8024 - 8866 (-)
Gene ID: HRGMv2_2447_52_8
Type: TC
Location: 8866 - 9738 (-)
Type: TC
Location: 8866 - 9738 (-)
Gene ID: HRGMv2_2447_52_9
Type: TC
Location: 9757 - 11040 (-)
Type: TC
Location: 9757 - 11040 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.